Show/Hide Control
umap_harmony1
umap_harmony2
cell_type
Astrocytes
B cells
EN-L2-3
EN-L4
EN-L5-6
EN-MIX
EN-PYR
Endo cells
Glia-MIX
IN-PVALB
IN-SST
IN-SV2C
IN-VIP
Microglia
OL
OPC
Phagocytes
Stromal cells
T cells
umap_harmony1
umap_harmony2
AQP4
0
1
2
3
umap_harmony1
umap_harmony2
CD74
0
2
4
6
umap_harmony1
umap_harmony2
VCAN
0
1
2
3
umap_harmony1
umap_harmony2
PLP1
0.0
0.5
1.0
1.5
2.0
2.5
umap_harmony1
umap_harmony2
SYT1
0.0
0.5
1.0
1.5
2.0
2.5
umap_harmony1
umap_harmony2
GAD1
0
1
2
3
umap_harmony1
umap_harmony2
Expressed
Both
GAD1
None
SYT1
Astrocytes
EN-L2-3
IN-VIP
Microglia
OL
OPC
C1
C2
C3
C4
C5
C6
C7
C8
C9
MS1
MS10
MS11
MS12
MS2
MS3
MS4
MS5
MS6
MS7
MS8
MS9
0.0
0.1
0.2
0.3
0.4
0.5
0.6
0.7
0.8
0.9
1.0
Dual
Genes
Stacked
Barplot
Heatmap
Violin
Marker
Genes
Density
Plot
DEG
CLI
2D
Density
Dot
Plot
Stacked
Violin
SanKey
Diagram
Genes
Detected
Track
Plot
Multi
-
UMAP
/
tSNE
Genes
4
AQP4
6
CD74
4
VCAN
2
PLP1
2
SYT1
3
GAD1
Astrocytes
EN-L2-3
IN-VIP
Microglia
OL
OPC
cell_type
Astrocytes
B cells
EN-L2-3
EN-L4
EN-L5-6
EN-MIX
EN-PYR
Endo cells
Glia-MIX
IN-PVALB
IN-SST
IN-SV2C
IN-VIP
Microglia
OL
OPC
Phagocytes
Stromal cells
T cells
cell type
1.5
2.0
2.5
3.0
3.5
4.0
AQP4
Capbatch:CAP6
Capbatch:CAP1
Capbatch:CAP2
Capbatch:CAP7
Capbatch:CAP3
Capbatch:CAP4
Capbatch:CAP5
Seqbatch:SEQ4
Seqbatch:SEQ1
Seqbatch:SEQ5
Seqbatch:SEQ2
Seqbatch:SEQ3
diagnosis:MS
region:prefrontal
region:motor-premotor
region:temporal
region:parietal
stage:Control
stage:Chronic inactive
diagnosis:Control
stage:Acute/Chronic active